Fluorescence Microscopes

The use of fluorescence microscopes helps researchers, laboratory technicians, and instructors view molecules and cellular components within biological samples. By utilizing fluorescent light in addition to or in place of standard light sources and introducing certain molecules that react to that light, fluorescence microscopes make it easier for users to detect individual proteins, locate parts of cells, and identify pathogens or disease markers in samples.  

ACCU-SCOPE provides microscopes that feature fluorescence as a standard observation method as well as a range of illuminators that can add these capabilities to other microscopes. Like all products in our complete range of research microscopes, our fluorescence microscopes and accessories deliver strong optical performance and numerous practical features. These imagine solutions are ideal for use in research, educational, clinical, and industrial settings. Learn more about our fluorescence imaging offerings below.

How Does Fluorescence Microscopy Work?

Preparing biological samples for fluorescence microscopy involves labeling them with fluorophores. These are fluorescent molecules that attach themselves to target elements within the sample, such as DNA or proteins. Once placed on the stage or inside the microscope, the sample is exposed to a specific wavelength of light generated by an LED, laser, or mercury lamp. The fluorophores absorb this light and release light at a longer wavelength and a different color. Using special optical emission filters and a dichroic mirror, the original emitted light is blocked and only the fluorescence emitted from the fluorophores in the sample can be seen through the eyepiece or camera. This produces a high-contrast image that enables the user to see the target elements with greater clarity than typical microscopy allows.

Choosing the Right Fluorescence Microscope

The fluorescence microscope that provides the best performance for a specific application comes down to how well it satisfies the needs for the specimen, the task, and whether images need to be captured or shared. When evaluating options, consider factors including the size of the sample, its surface characteristics, and the level of detail required.

Fluorescence Ready

In many cases, a microscope stand can be upgraded to fluorescence after purchase, however some microscopes do not offer this flexibility.  When selecting a microscope platform, consider if it will be equipped with fluorescence from the beginning or added later. 

Other considerations are the number of fluorescence channels that will be required.  Fluorescence channels include the excitation light spectrum and emission light spectrum.  Most common configurations utilize 1, 2 or 3 fluorescence channels allowing the discrete observation of 1, 2 or 3 fluorophores.  Some research applications may require 4, 5, or more discrete channels or multi-band configurations (for simultaneous observation of 2 or more channels) – in these scenarios, both the illumination source and the fluorescence filter cube turret must support the necessary excitation wavelengths and filter cube positions.

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Magnification, Optics, and Field of View

Fluorescence microscopes with zoom features enable users to adjust the magnification as needed. This is ideal for varied samples and tasks that move from broader inspection to finer detail. On the other hand, fixed magnification supports repeatable work that calls for the same viewing level of multiple samples.

When selecting optical configurations, consider the field of view required. Higher-power magnification reveals more detail but is more narrowly focused. Lower-power lenses offer a wider view of the sample but sacrifice the finer details.

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Fluorescence Illumination Source

Most modern fluorescence microscopes utilize LED light sources due to their energy-efficiency and versatility. However, there are some advanced fluorescence microscopy techniques that call for lasers to produce higher-contrast and higher-resolution images. Fluorescence light sources must be selected to provide illumination in the excitation spectra for the fluorophores being used in the experiments.  Several fluorophores are very common (e.g., DAPI, GFP, RFP), and fluorescence illumination has been developed to specifically address these applications.

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Ergonomics and Accessories

User comfort is an important consideration for microscopy, especially during extended research sessions. This is why a microscope should include ergonomic features such as adjustable eyepieces, pivoting heads, moveable workstations, and focus-tension controls. These can support natural viewing positions that put less strain on the user’s bodies. Other accessories such as stage plates and specimen holders can enhance the functionality and usability of the instrument even further.

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EXI-1000

ACCU-SCOPE EXI-1000 — Built for Where Your Research Is Going The EXI-1000 is a fully motorized inverted research microscope designed for life scientists who demand more from their imaging platform — more flexibility, more consistency, and more room to grow. Whether you're running routine fluorescence assays today or pushing toward super-resolution and single-molecule work tomorrow,…

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EXI-600

The EXI-600 is ACCU-SCOPE's flagship inverted microscope for life science research applications.  The intelligent frame of the EXI-600 knows the objective and fluorescence filter cube position and light intensity and displays them right on the front of the microscope so you can work with confidence.  With 3 camera ports and multiple light path selections, you…

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EXI-410

ACCU-SCOPE's EXI-410 Inverted Microscope delivers outstanding optical performance, convenience, flexibility and value. Ideal for the daily rigors of tissue culture applications and more advanced observation methods, the EXI-410 features a newly designed NIS60 infinity-corrected optical path with long working distance Plan Achromat and semi-Apochromatic objectives and an extra-long working distance condenser. The EXI-410 is available…

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EXI-310

Utilizing ACCU-SCOPE's AIS optical system and LED illumination for both diascopic (transmitted) and epi-fluorescence imaging, the EXI-310 microscope offers brilliant, crisp images, enabling more efficient cell culture observation and digital imaging. The streamlined design and operation enhance its use for routine laboratory work, and the compact size allows the EXI-310 to easily fit into or…

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EXC-500

ACCU-SCOPE's flagship EXC-500 Microscope offers best-in-class performance and value for clinical laboratory and research applications. The NIS infinity optical system provides sharp, crisp images with outstanding detail. Its modular design allows the EXC-500 to accommodate a vast array of research, fluorescence, phase contrast, DIC and darkfield applications. The EXC-500 features optimized LED-based ECO-illumination capable of…

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EXC-400

The EXC-400 from ACCU-SCOPE is designed for a broad range of microscopy applications in clinical, academic, and research environments. The EXC-400 is ideal for routine observations and can be configured with several contrast methods to meet your application needs including brightfield (standard), phase contrast, polarized light, gout analysis, and fluorescence. Choose a trinocular or ergonomic…

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EXC-360

The NEW EXC-360 from ACCU-SCOPE delivers exceptional optical performance, versatility and durability for clinical, veterinary and education laboratory environments. With infinity Plan Achromat objectives and brilliant LED illumination, the EXC-360 produces bright, high-resolution images. The trinocular head is ready to accept a microscopy camera (requires C-mount camera adapter) for documentation, analysis, and instructional purposes. The…

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EXC-350

The EXC-350 from ACCU-SCOPE delivers a high level of optical performance, versatility and durability for clinical, veterinary and education laboratory environments. With our infinity plan objectives and brilliant LED illumination, the EXC-350 produces bright, crisp, and sharp images. The trinocular port is ready to accept a microscopy camera (requires c-mount camera adapter) for documentation, analysis,…

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ACCU-fluor LED Illuminator

ACCU-fluor LED fluorescence illuminators are an easy and economical way to add fluorescence to your upright microscope.  We offer single, dual and triple-channel (including UV, blue, green, yellow, red) illuminators to accommodate the most common fluorophores in use today.  ACCU-fluor illuminators fit all ACCU-SCOPE and most major brands of upright (compound) microscopes.

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X-Cite® XYLIS II™

The X-Cite® XYLISâ„¢ II is a true arc lamp replacement, providing outstanding brightness and broad-spectrum illumination for both routine and advanced fluorescence imaging. With quieter operation—up to 10 dB less noise than the original XYLIS—and increased optical output, it delivers the broadest spectrum available in a white-light LED for microscopy. Powered by patented LaserLED Hybrid…

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X-Cite® TETREM™

The X-Cite® TETREMâ„¢ four-channel LED illumination system delivers the performance and flexibility today’s fluorescence imaging demands. Designed for power, precision, and ease of use, it provides dependable excitation for the most commonly used fluorophores in microscopy. Its compact, cost-effective design makes it an excellent solution for laboratories performing live cell imaging or upgrading from mercury…

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X-Cite® mini+®

The X-Cite® mini+® is a compact, white-light LED illumination system engineered for dependable performance in routine fluorescence imaging. Combining high power, small footprint, and exceptional value, it delivers bright, even illumination ideal for a wide range of microscopy applications. Built with the latest LED technology, the X-Cite mini+ provides more power at the sample plane…

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Frequently Asked Questions About Fluorescence Microscopes

What are the most common applications for fluorescence microscopy?

Some of the most common uses for these microscopes in life sciences contexts include live-cell imaging, pathogen detection, neuroscience research, and protein localization.

Fluorophores are chemical compounds or proteins that absorb and emit fluorescence when they are exposed to certain wavelengths of light. They are applied to specific cellular structures to make them more visible under microscopy.

Compared to typical microscopy methods, fluorescence microscopy enables researchers to target and view only the individual elements within the cell they wish to study. Because the process creates a high-contrast image on a dark background, it also makes those elements easier to distinguish and observe.

LEDs have become the standard excitation lights in these instruments because they offer longer lifespans, more-stable light outputs, and greater energy efficiency than the mercury or xenon lamps used in the past. Furthermore, mercury lamps must be replaced regularly (every 200 hours), and mercury is a known hazardous material requiring special disposal.